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GeneCorner plasmid details

Last data update: 24 January 2024 16:39 CET

Plasmid name: pUBQ10:MSCP-CFP-NLS-BASTA (LMBP 9028)

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Price category: Cat. 1 (cf. price list)
Status: GeneCorner non-core plasmid
Depositor's sequence: p9028.gb
Sequence
analysis results
Genecorner:

-

Cloned DNA: Aequorea victoria green fluorescent protein DNA (GFP); enhanced cyan fluorescent variant (ECFP)
Phage MS2 coat protein (MS2-CP, MSCP); N-terminal
SV40 large T-antigen nuclear localization signal (NLS); C-terminal
Promoter: Arabidopsis thaliana ubiquitin 10 promoter (UBQ10)
Cauliflower mosaic virus (CaMV) 35S promoter
Ribosome
binding site:
-
Terminator: -
Selection marker: Kanamycin (kan)
Phosphinotricin (basta)
Replicon: Escherichia coli plasmid pMB1 origin
Pseudomonas plasmid pVS1 origin
Host range: Escherichia coli
Plant cells
Gram-negative bacterial strains
Further information: The MS2-CP binds a 19 nucleotide stem-loop structure with high specificity and affinity. Fused to the fluorescent ECFP tag, this system can be used to visualise the localisation of RNAs in plant cells.
Target RNAs can be introduced by Gateway recombination with p35S:6xMS2-Gateway-BASTA (LMBP 9026).
Other names of the plasmid are pSCJ290 and pUbi10:MSCP-CFP-NLS BASTA.
EMBL Accession number: -
Latest sequence update: 21/01/2015
Authenticity test: Restriction enzyme pattern analysed at GeneCorner: EcoRI, HincII, NotI and PstI.

As compared to the nucleotide sequence file, an additional PstI site appears to be present.
Class: Recombinant plasmid
Type: Plasmid
History of deposit: This plasmid was deposited by Dr U. Hammes(1).
(1) Department of Cell Biology and Plant Biochemistry, University of Regensburg, Regensburg, Germany
Plasmid reference: Schönberger et al., Plant J. 71 (2012), 173-181 [PMID: 22268772]
Related plasmid reference: LeCuyer et al., Biochemistry 34 (1995), 10600-10606 [PMID: 7544616]
Bertrand et al., Mol. Cell 2 (1998), 437-445 [PMID: 9809065]
Restricted distribution: - BCCM MTA
Distributed as: H/P active culture or plasmid DNA
Host for distribution: Escherichia coli K12 DH5α
Host reference: Focus 8 (1986), 9
Related host reference: Woodcock et al., Nucleic Acids Res. 17 (1989), 3469-3478 [PMID: 2657660]
Rodriguez-Quinones et al., Focus 15 (1993), 110-112
Hanahan, J. Mol. Biol. 166 (1983), 557-580 [PMID: 6345791] [DOI: 10.1016/s0022-2836(83)80284-8]
Hanahan, in 'DNA Cloning: A Practical Approach Volume I', IRL Press, Oxford (1985), 109-135 [ISSN/ISBN: 0947946187]
Grant et al., Proc. Natl. Acad. Sci. U.S.A. 87 (1990), 4645-4649 [PMID: 2162051]
Cultivation medium: LB-Lennox + kanamycin (50 μg/ml)
Cultivation temperature: 37°C
Biosafety level: L1
Cultivation remark: -
Other culture collection numbers: -

Refer in your Materials and Methods:

pUBQ10:MSCP-CFP-NLS-BASTA (LMBP 9028) is available at BCCM/GeneCorner. This plasmid was deposited by Dr U. Hammes and was published in Schönberger et al., 2012.

Note: Up-to-date, validated data are enclosed with the biological material. Nevertheless, these data are a snapshot at a given moment; further updates are always possible.

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