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LMG strain details

Last data update: 17 December 2013  

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Strain Number: LMG 1223   Add to cart
Speciesname: Pseudomonas mendocina Palleroni 1970 AL
Species comment: Authentic Pseudomonas species.
Other collections' numbers: API 25.5.82;ATCC 25411;CCEB 849;CCUG 12440;CCUG 1781;CECT 320;CIP 75.21;CNCTC Ps 167/68;DSM 50017;FIRDI 458;ICPB 3725;IEM Ps 167/88;IFO 14162;IMET 11176;JCM 5966;KCTC 22636;Kosako 85008;NCIB 10541;NCTC 10897;Palleroni CH 50;Solanes CH 50;USCC 2353;VKM B-1
Restrictions: Biohazard group 2
Status: Type strain
Biological origin: soil enriched with ethanol as carbon source
Geographic origin: Argentina
Isolated by: Palleroni et al.
Depositor: B.Contopoulos
History: <- 1973, B.Contopoulos ATCC 25411 --- Palleroni et al.
Conditions for growth on solid media: Medium 2, 28°C
Remarks: Culture contains two stable colony types giving identical gelelectrophoretic protein profiles (SDS-PAGE)
Nucleotide sequences: Pseudomonas mendocina strain BCRC 10458 16S-23S ribosomal RNA intergenicspacer, complete sequence
EMBL Accession number: EU014574 (BCRC 10458), view at EMBL, GenBank, DDBJ
Length: 516
Creation date: 2008-08-30

Pseudomonas mendocina partial rpoD gene for DNA-directed RNA polymerasesubunit D, strain ATCC 25411
EMBL Accession number: AJ633567 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 777
Creation date: 2005-03-19

Pseudomonas mendocina partial rpoB gene for DNA-directed RNA polymerasebeta chain, strain LMG 1223T
EMBL Accession number: AJ717440 (LMG 1223), view at EMBL, GenBank, DDBJ
Length: 1142
Creation date: 2004-09-25

Pseudomonas mendocina partial catA gene for catechol 1,2-dioxygenase,strain ATCC 25411
EMBL Accession number: AJ633096 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 312
Creation date: 2004-07-30

Pseudomonas mendocina partial nosZ gene for nitrous-oxide reductase, strainATCC 25411
EMBL Accession number: AJ633100 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 453
Creation date: 2004-07-30

Pseudomonas mendocina partial gyrB gene for DNA gyrase subunit B, strainATCC 25411
EMBL Accession number: AJ633103 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 852
Creation date: 2004-07-30

Pseudomonas mendocina partial 16S rRNA gene, type strain ICMP 13540T
EMBL Accession number: AJ308310 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 1349
Creation date: 2002-01-04

Pseudomonas mendocina partial recA gene, strain ICMP 13540
EMBL Accession number: AJ316157 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 598
Creation date: 2002-01-04

Pseudomonas mendocina partial carA gene for carbamoylphosphate synthetasesmall subunit
EMBL Accession number: AJ414222 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 624
Creation date: 2002-01-04

Pseudomonas mendocina partial atpD gene for atpD beta synthase chain
EMBL Accession number: AJ414246 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 776
Creation date: 2002-01-04

P.mendocina (strain DSM 50017T) 16S rRNA gene
EMBL Accession number: Z76674 (DSM 50017), view at EMBL, GenBank, DDBJ
Length: 1451
Creation date: 2001-12-17

Pseudomonas mendocina partial rpoB gene for RNA polymerase beta subunit,strain ATCC 25411T
EMBL Accession number: AJ279967 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 446
Creation date: 2000-12-06

Pseudomonas mendocina 16S ribosomal RNA gene, partial sequence
EMBL Accession number: AF094734 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 1457
Creation date: 2000-10-05

Pseudomonas mendocina OprF (oprF) gene, partial cds
EMBL Accession number: AF117966 (LMG 1223), view at EMBL, GenBank, DDBJ
Length: 954
Creation date: 1999-04-12

Pseudomonas mendocina LMG 1223 major outer membrane lipoprotein I (oprI)gene, partial cds
EMBL Accession number: AF065948 (LMG 1223), view at EMBL, GenBank, DDBJ
Length: 249
Creation date: 1998-06-11

P.mendocina (strain LMG 1223T) 16S rRNA gene
EMBL Accession number: Z76664 (LMG 1223), view at EMBL, GenBank, DDBJ
Length: 1456
Creation date: 1997-03-25

Pseudomonas mendocina 16S rRNA gene, complete sequence
EMBL Accession number: D84016 (NCIB 10541), view at EMBL, GenBank, DDBJ
Length: 1526
Creation date: 1996-04-08

Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile(tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23SrRNA) gene
EMBL Accession number: L28159 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 702
Creation date: 1994-04-20

Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile(tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23SrRNA) gene
EMBL Accession number: L28160 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 705
Creation date: 1994-04-20

Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile(tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23SrRNA) gene
EMBL Accession number: L28161 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 705
Creation date: 1994-04-20

Pseudomonas mendocina 16S ribosomal RNA (16S rRNA) gene, transfer RNA-Ile(tRNA-Ile) gene, transfer RNA-Ala (tRNA-Ala) gene, 23S ribosomal RNA (23SrRNA) gene
EMBL Accession number: L28162 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 707
Creation date: 1994-04-17

Pseudomonas mendocina 16S ribosomal RNA
EMBL Accession number: M59154 (ATCC 25411), view at EMBL, GenBank, DDBJ
Length: 1490
Creation date: 1992-04-01

References: Approved Lists of Bacterial Names, Int J Syst Bacteriol, 30, 225-420, 1980 .

Ait Tayeb L, Ageron E, Grimont F, Grimont PA, Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol, 156, 763-773, 2005 Jun-Jul [PMID: 15950132] .

Anzai Y, Kudo Y, Oyaizu H, The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera, Int J Syst Bacteriol, 47, 249-251, 1997 Apr [PMID: 9103607] .

Cantwell, S. G., Lau, E. P., Watt, D. S., Fall, D., Biodegradation of acyclic isoprenoids by Pseudomonas species, J Bacteriol, 135, 324-333, 1978 [PMID: 681275] .

Cladera AM, Bennasar A, Barcelo M, Lalucat J, Garcia-Valdes E, Comparative genetic diversity of Pseudomonas stutzeri genomovars, clonal structure, and phylogeny of the species, J Bacteriol, 186, 5239-5248, 2004 Aug [PMID: 15292125] .

Cornelis P, Bouia A, Belarbi A, Guyonvarch A, Kammerer B, Hannaert V, Hubert JC, Cloning and analysis of the gene for the major outer membrane lipoprotein from Pseudomonas aeruginosa, Mol Microbiol, 3, 421-428, 1989 Mar [PMID: 2473376] .

De Vos D, Bouton C, Sarniguet A, De Vos P, Vauterin M, Cornelis P, Sequence diversity of the oprI gene, coding for major outer membrane lipoprotein I, among rRNA group I pseudomonads, J Bacteriol, 180, 6551-6556, 1998 Dec [PMID: 9851998] .

Diard S, Carlier JP, Ageron E, Grimont PA, Langlois V, Guerin P, Bouvet OM, Accumulation of poly(3-hydroxybutyrate) from octanoate in different pseudomonas belonging to the rRNA homology group I, Syst Appl Microbiol, 25, 183-188, 2002 Aug [PMID: 12353870] .

Gherna, R, Pienta, P, Cote, R (eds), American Type Culture Collection. Catalogue of bacteria and phages, 18th ed., 1992, American Type Culture Collection, 1992 .

Hilario EM, Buckley TR, Young JM, Improved resolution on the phylogenetic relationships among Pseudomonasby the combined analysis of atpD, carA, recA and 16S rDNA, Antonie Van Leeuwenhoek, 86, 51-64, 2004 [PMID: 15103237] .

Hildebrand DC, Palleroni NJ, Hendson M, Toth J, Johnson JL, Pseudomonas flavescens sp. nov., isolated from walnut blight cankers, Int J Syst Bacteriol, 44, 410-415, 1994 Jul [PMID: 7520732] .

Lorenz MG, Sikorski J, The potential for intraspecific horizontal gene exchange by natural genetic transformation: sexual isolation among genomovars of Pseudomonas stutzeri, Microbiology, 146 Pt 12, 3081-3090, 2000 Dec [PMID: 11101666] .

Moore ERB, Mau M, Arnscheidt A, Boettger EC, Hutson RA, Collins MD, Van de Peer Y, De Wachter R, Timmis KN, The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships, Syst Appl Microbiol, 19, 478-492, 1996 .

Palleroni NJ, Doudoroff M, Stanier RY, Solanes RE, Mandel M, Taxonomy of the aerobic pseudomonads: the properties of the Pseudomonas stutzeri group, J Gen Microbiol, 60, 215-231, 1970 Feb [PMID: 5488055] .

Timm, A., Steinbnchel, A., Formation of polyesters consisting of medium-chain-length 3-hydroxyalkanoic acids from gluconate by Pseudomonas aeruginosa and other fluorescent pseudomonads, Appl Environ Microbiol, 56, 3360-3367, 1990 [PMID: 2125185] .

Tyler SD, Strathdee CA, Rozee KR, Johnson WM, Oligonucleotide primers designed to differentiate pathogenic pseudomonads on the basis of the sequencing of genes coding for 16S-23S rRNA internal transcribed spacers, Clin Diagn Lab Immunol, 2, 448-453, 1995 Jul [PMID: 7583922] .

Vermeiren H, Willems A, Schoofs G, de Mot R, Keijers V, Hai W, Vanderleyden J, The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri, Syst Appl Microbiol, 22, 215-224, 1999 May [PMID: 10390872] .

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