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LMG strain details

Last data update: 11 June 2014  

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Strain Number: LMG 1245   Add to cart

STRAIN FOR TEACHING PURPOSE:CELL AND COLONY MORPHOLOGY:MOTILITY:Polar flagella
Speciesname: Pseudomonas chlororaphis subsp. aureofaciens (Kluyver 1956) Peix, Valverde, Rivas, Igual, Ramirez-Bahena, Mateos, Santa-Regina, Rodriguez-Barrueco, Martinez-Molina and Velazquez 2007 VP
Objective synonyms: Pseudomonas aureofaciens Kluyver 1956 AL
Other collections' numbers: ATCC 13985;Bouman 2;CCEB 518;CCEB 649;CCUG 712;Delft E.III.9.26.1;Delft L4788;FIRDI 1057;IAM 12353;IFO 3521;LMD 37.27;NRRL B-1576;PD 1585;Sneath D-297;Stanier 38;USCC 1335;USCC 2033
Restrictions: Biohazard group 1
Status: Type strain
Biological origin: Maas River clay suspended in kerosene for three weeks
Geographic origin: Netherlands
Isolated by: H.Bouman
Depositor: CULTURE COLLECTION OF ENTOMOGENOUS BACTERIA - CCEB Czech Republic
History: <- 1964, CULTURE COLLECTION OF ENTOMOGENOUS BACTERIA - CCEB Czech Republic CCEB 518 (Pseudomonas aureofaciens) <- 1959, NRRL <- Technische Hogeschool Delft <- A.Kluyver (Pseudomonas polychromogenes) <- H.Bouman (1937)
Conditions for growth on solid media: Medium 2, 28°C
Properties: Production of pyrrolnitrin;CELL AND COLONY MORPHOLOGY:MOTILITY:Polar flagella of teaching
Remarks: Type strain of Pseudomonas aureofaciens
Nucleotide sequences: Pseudomonas chlororaphis strain ATCC 13985 60 kDa chaperonin (cpn60) gene,partial cds
EMBL Accession number: EF685236 (ATCC 13985), view at EMBL, GenBank, DDBJ
Length: 552
Creation date: 2007-11-19

Pseudomonas chlororaphis partial rpoB gene for DNA-directed RNA polymerasebeta chain, strain LMG 1245T
EMBL Accession number: AJ717426 (LMG 1245), view at EMBL, GenBank, DDBJ
Length: 1166
Creation date: 2004-09-25

Pseudomonas chlororaphis strain DSM 6698 16S ribosomal RNA gene, completesequence
EMBL Accession number: AY509898 (DSM 6698), view at EMBL, GenBank, DDBJ
Length: 1530
Creation date: 2004-01-20

Pseudomonas chlororaphis subsp. aureofaciens partial 16S rRNA gene, typestrain ICMP 13610T
EMBL Accession number: AJ308300 (ICMP 13610), view at EMBL, GenBank, DDBJ
Length: 1329
Creation date: 2002-01-04

Pseudomonas chlororaphis partial recA gene, strain ICMP 13610
EMBL Accession number: AJ316146 (ATCC 13985), view at EMBL, GenBank, DDBJ
Length: 598
Creation date: 2002-01-04

Pseudomonas aureofaciens partial carA gene for carbamoylphosphatesynthetase small subunit
EMBL Accession number: AJ414211 (ATCC 13985), view at EMBL, GenBank, DDBJ
Length: 624
Creation date: 2002-01-04

Pseudomonas chlororaphis subsp. aureofaciens partial atpD gene for atpDbeta synthase chain
EMBL Accession number: AJ414235 (ATCC 13985), view at EMBL, GenBank, DDBJ
Length: 776
Creation date: 2002-01-04

Pseudomonas aureofaciens 16S ribosomal RNA gene, partial sequence
EMBL Accession number: AF094722 (ATCC 13985), view at EMBL, GenBank, DDBJ
Length: 1458
Creation date: 2000-10-05

Pseudomonas chlororaphis subsp. aureofaciens partial bolA gene and ORF1 DNA
EMBL Accession number: AJ243397 (ATCC 13985), view at EMBL, GenBank, DDBJ
Length: 726
Creation date: 1999-06-29

Pseudomonas aureofaciens OprF (oprF) gene, complete cds
EMBL Accession number: AF117961 (LMG 1245), view at EMBL, GenBank, DDBJ
Length: 978
Creation date: 1999-04-12

Pseudomonas chlororaphis LMG 1245 major outer membrane lipoprotein I (oprI)gene, partial cds
EMBL Accession number: AF065980 (LMG 1245), view at EMBL, GenBank, DDBJ
Length: 249
Creation date: 1998-06-11

Pseudomonas chlororaphis subsp. aureofaciens 16S rRNA gene
EMBL Accession number: Z76656 (DSM 6698), view at EMBL, GenBank, DDBJ
Length: 1436
Creation date: 1997-03-25

Pseudomonas chlororaphis gene for 16S rRNA, partial sequence
EMBL Accession number: D84008 (IAM 12353), view at EMBL, GenBank, DDBJ
Length: 1408
Creation date: 1996-04-08

P.aureofaciens nirK gene encoding copper-containing nitrite reductase
EMBL Accession number: Z21945 (ATCC 13985), view at EMBL, GenBank, DDBJ
Length: 1143
Creation date: 1993-03-12

References: 1956, 412, System. Appl. Microbiol, 72 .

Int J Syst Bacteriol, 43, 191, 1966 .

J Bacteriol, 72, 406 J. Bacteriol, 1956 .

Approved Lists of Bacterial Names, Int J Syst Bacteriol, 30, 225-420, 1980 .

Kluyver A, J Pseudomonas aureofaciens nov spec and its pigments J Bacteriol, 72, 406-411, 1956 .

Ait Tayeb L, Ageron E, Grimont F, Grimont PA, Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol, 156, 763-773, 2005 Jun-Jul [PMID: 15950132] .

Anzai Y, Kudo Y, Oyaizu H, The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera, Int J Syst Bacteriol, 47, 249-251, 1997 Apr [PMID: 9103607] .

CONWAY HF, HAYNES WC, JACKSON RW, LOCKE JM, PRIDHAM TG, SOHNS VE, STODOLA FH, Pseudomonas aureofaciens Kluyver and phenazine alpha-carboxylic acid, its characteristic pigment, J Bacteriol, 72, 412-417, 1956 Sep [PMID: 13366938] .

Cornelis P, Bouia A, Belarbi A, Guyonvarch A, Kammerer B, Hannaert V, Hubert JC, Cloning and analysis of the gene for the major outer membrane lipoprotein from Pseudomonas aeruginosa, Mol Microbiol, 3, 421-428, 1989 Mar [PMID: 2473376] .

De Vos D, Bouton C, Sarniguet A, De Vos P, Vauterin M, Cornelis P, Sequence diversity of the oprI gene, coding for major outer membrane lipoprotein I, among rRNA group I pseudomonads, J Bacteriol, 180, 6551-6556, 1998 Dec [PMID: 9851998] .

Diard S, Carlier JP, Ageron E, Grimont PA, Langlois V, Guerin P, Bouvet OM, Accumulation of poly(3-hydroxybutyrate) from octanoate in different pseudomonas belonging to the rRNA homology group I, Syst Appl Microbiol, 25, 183-188, 2002 Aug [PMID: 12353870] .

Glockner AB, Jungst A, Zumft WG, Copper-containing nitrite reductase from Pseudomonas aureofaciens is functional in a mutationally cytochrome cd1-free background (NirS-) of Pseudomonas stutzeri, Arch Microbiol, 160, 18-26, 1993 [PMID: 8352648] .

Hilario EM, Buckley TR, Young JM, Improved resolution on the phylogenetic relationships among Pseudomonasby the combined analysis of atpD, carA, recA and 16S rDNA, Antonie Van Leeuwenhoek, 86, 51-64, 2004 [PMID: 15103237] .

Johnson JL, Palleroni NJ, Deoxyribonucleic acid similarities among Pseudomonas species, Int J Syst Bacteriol, 39, 230-235, 1989 .

KLUYVER AJ, Pseudomonas aureofaciens nov. spec. and its pigments, J Bacteriol, 72, 406-411, 1956 Sep [PMID: 13366937] .

LYSENKO O, Pseudomonas--an attempt at a general classification, J Gen Microbiol, 25, 379-408, 1961 Jul [PMID: 13764624] .

Moore ERB, Mau M, Arnscheidt A, Boettger EC, Hutson RA, Collins MD, Van de Peer Y, De Wachter R, Timmis KN, The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships, Syst Appl Microbiol, 19, 478-492, 1996 .

Peix A, Valverde A, Rivas R, Igual JM, Ramirez-Bahena MH, Mateos PF, Santa-Regina I, Rodriguez-Barrueco C, Martinez-Molina E, Velazquez E, Reclassification of Pseudomonas aurantiaca as a synonym of Pseudomonas chlororaphis and proposal of three subspecies, P. chlororaphis subsp. chlororaphis subsp. nov., P. chlororaphis subsp. aureofaciens subsp. nov., comb. nov. and P. chlororaphis subsp. aurantiaca subsp. nov., comb. nov, Int J Syst Evol Microbiol, 57, 1286-1290, 2007 Jun [PMID: 17551044] .

Stanier RY, Palleroni NJ, Doudoroff M, The aerobic pseudomonads: a taxonomic study, J Gen Microbiol, 43, 159-271, 1966 May [PMID: 5963505] .

Vermeiren H, Willems A, Schoofs G, de Mot R, Keijers V, Hai W, Vanderleyden J, The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri, Syst Appl Microbiol, 22, 215-224, 1999 May [PMID: 10390872] .

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