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LMG strain details

Last data update: 11 June 2014  

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Strain Number: LMG 2152   Add to cart
Speciesname: Pseudomonas caricapapayae Robbs 1956 AL
Species comment: Authentic Pseudomonas species.
Other collections' numbers: ATCC 33615;CCM 7748;Dye NP2;ICMP 2855;ICPB PC138;NCPPB 1873;PDDCC 2855;Robbs ENA-378
Restrictions: Biohazard group 1
Status: Type strain
Biological origin: Carica papaya
Geographic origin: Brazil
Isolated by: Charles F.Robbs Embrapa-CTAA Brazil
Depositor: National Collection of Plant Pathogenic Bacteria (NCPPB) United Kingdom
History: <- 1981, National Collection of Plant Pathogenic Bacteria (NCPPB) United Kingdom <- 1966, ICPB <- Charles F.Robbs Embrapa-CTAA Brazil (1966)
Conditions for growth on solid media: Medium 2, 28°C
Remarks: Culture contains two stable colony types giving identical gelelectrophoretic protein profiles (SDS-PAGE)
Nucleotide sequences: Pseudomonas caricapapayae partial rpoB gene for DNA-directed RNA polymerasebeta chain, strain LMG 2152T
EMBL Accession number: AJ717437 (LMG 2152), view at EMBL, GenBank, DDBJ
Length: 1146
Creation date: 2004-09-25

Pseudomonas caricapapayae strain LMG 2152 type III secretion system protein(hrcN) gene, partial cds
EMBL Accession number: AY457025 (LMG 2152), view at EMBL, GenBank, DDBJ
Length: 254
Creation date: 2003-11-26

Pseudomonas caricapapayae gyrB gene for DNA gyrase subunit B, partial cds,strain:NCPPB 1873
EMBL Accession number: AB039454 (NCPPB 1873), view at EMBL, GenBank, DDBJ
Length: 890
Creation date: 2000-11-02

Pseudomonas caricapapayae rpoD gene for DNA-directed RNA polymerase subunitD, partial cds, strain:NCPPB 1873
EMBL Accession number: AB039507 (NCPPB 1873), view at EMBL, GenBank, DDBJ
Length: 807
Creation date: 2000-11-02

Pseudomonas caricapapayae LMG 2152 major outer membrane lipoprotein I(oprI) gene, partial cds
EMBL Accession number: AF065956 (LMG 2152), view at EMBL, GenBank, DDBJ
Length: 249
Creation date: 1998-06-11

Pseudomonas caricapapayae 16S rRNA gene
EMBL Accession number: D84010 (ATCC 33615), view at EMBL, GenBank, DDBJ
Length: 1456
Creation date: 1996-04-11

References: Approved Lists of Bacterial Names, Int J Syst Bacteriol, 30, 225-420, 1980 .

Ait Tayeb L, Ageron E, Grimont F, Grimont PA, Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol, 156, 763-773, 2005 Jun-Jul [PMID: 15950132] .

Anzai Y, Kudo Y, Oyaizu H, The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera, Int J Syst Bacteriol, 47, 249-251, 1997 Apr [PMID: 9103607] .

Cornelis P, Bouia A, Belarbi A, Guyonvarch A, Kammerer B, Hannaert V, Hubert JC, Cloning and analysis of the gene for the major outer membrane lipoprotein from Pseudomonas aeruginosa, Mol Microbiol, 3, 421-428, 1989 Mar [PMID: 2473376] .

De Vos D, Bouton C, Sarniguet A, De Vos P, Vauterin M, Cornelis P, Sequence diversity of the oprI gene, coding for major outer membrane lipoprotein I, among rRNA group I pseudomonads, J Bacteriol, 180, 6551-6556, 1998 Dec [PMID: 9851998] .

Diard S, Carlier JP, Ageron E, Grimont PA, Langlois V, Guerin P, Bouvet OM, Accumulation of poly(3-hydroxybutyrate) from octanoate in different pseudomonas belonging to the rRNA homology group I, Syst Appl Microbiol, 25, 183-188, 2002 Aug [PMID: 12353870] .

Karpouzas DG, Morgan JA, Walker A, Isolation and characterization of 23 carbofuran-degrading bacteria from soils from distant geographical areas, Lett Appl Microbiol, 31, 353-358, 2000 Nov [PMID: 11069636] .

Rezzonico F, Defago G, Moenne-Loccoz Y, Comparison of ATPase-Encoding Type III Secretion System hrcN Genes in Biocontrol Fluorescent Pseudomonads and in Phytopathogenic Proteobacteria, Appl Environ Microbiol, 70, 5119-5131, 2004 Sep [PMID: 15345390] .

Yamamoto S, Kasai H, Arnold DL, Jackson RW, Vivian A, Harayama S, Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes, Microbiology, 146 ( Pt 10), 2385-2394, 2000 Oct [PMID: 11021915] .

Young JM, et al, Names of plant pathogenic bacteria 1864-1995, Rev Plant Pathol, 75, 721-763, 1996 .

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