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LMG strain details

Last data update: 17 December 2013  

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Strain Number: LMG 2172   Add to cart
Speciesname: Pseudomonas corrugata Roberts and Scarlett 1981VL emend. Sutra, Siverio, Lopez, Hunault, Bollet and Gardan 1997 VP
Species comment: Authentic Pseudomonas species.
Other collections' numbers: ATCC 29736;CCM 7747;CFBP 2431;ICMP 5819;NCPPB 2445;PDDCC 5819;Slade 939/1
Restrictions: Biohazard group 1
Status: Type strain
Biological origin: Lycopersicon esculentum, pith necrosis
Geographic origin: United Kingdom
Isolated by: G.Slade
Depositor: National Collection of Plant Pathogenic Bacteria (NCPPB) United Kingdom
History: <- 1981, National Collection of Plant Pathogenic Bacteria (NCPPB) United Kingdom <- 1972, G.Slade (1972)
Conditions for growth on solid media: Medium 2, 28°C
Nucleotide sequences: Pseudomonas corrugata partial rpoB gene for DNA-directed RNA polymerasebeta chain, strain LMG 2172T
EMBL Accession number: AJ717487 (LMG 2172), view at EMBL, GenBank, DDBJ
Length: 852
Creation date: 2004-09-25

Pseudomonas corrugata gyrB gene for DNA gyrase subunit B, partial cds,strain:NCPPB 2445
EMBL Accession number: AB039460 (NCPPB 2445), view at EMBL, GenBank, DDBJ
Length: 890
Creation date: 2000-11-02

Pseudomonas corrugata rpoD gene for DNA-directed RNA polymerase subunit D,partial cds, strain:NCPPB 2445
EMBL Accession number: AB039566 (NCPPB 2445), view at EMBL, GenBank, DDBJ
Length: 804
Creation date: 2000-11-02

Pseudomonas corrugata LMG 2172 major outer membrane lipoprotein I (oprI)gene, partial cds
EMBL Accession number: AF065970 (LMG 2172), view at EMBL, GenBank, DDBJ
Length: 249
Creation date: 1998-06-11

Pseudomonas corrugata DNA for 16S ribosomal RNA, 23S ribosomal RNA, partialsequence
EMBL Accession number: D87087 (ATCC 29736), view at EMBL, GenBank, DDBJ
Length: 553
Creation date: 1996-10-22

Pseudomonas corrugata 16S rRNA gene
EMBL Accession number: D84012 (ATCC 29736), view at EMBL, GenBank, DDBJ
Length: 1454
Creation date: 1996-04-11

References: Int J Syst Bacteriol, 48, 329, 1998 .

Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 6, Int J Syst Bacteriol, 31, 215-218, 1981 .

Ait Tayeb L, Ageron E, Grimont F, Grimont PA, Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol, 156, 763-773, 2005 Jun-Jul [PMID: 15950132] .

Anzai Y, Kudo Y, Oyaizu H, The phylogeny of the genera Chryseomonas, Flavimonas, and Pseudomonas supports synonymy of these three genera, Int J Syst Bacteriol, 47, 249-251, 1997 Apr [PMID: 9103607] .

Cornelis P, Bouia A, Belarbi A, Guyonvarch A, Kammerer B, Hannaert V, Hubert JC, Cloning and analysis of the gene for the major outer membrane lipoprotein from Pseudomonas aeruginosa, Mol Microbiol, 3, 421-428, 1989 Mar [PMID: 2473376] .

De Vos D, Bouton C, Sarniguet A, De Vos P, Vauterin M, Cornelis P, Sequence diversity of the oprI gene, coding for major outer membrane lipoprotein I, among rRNA group I pseudomonads, J Bacteriol, 180, 6551-6556, 1998 Dec [PMID: 9851998] .

Diard S, Carlier JP, Ageron E, Grimont PA, Langlois V, Guerin P, Bouvet OM, Accumulation of poly(3-hydroxybutyrate) from octanoate in different pseudomonas belonging to the rRNA homology group I, Syst Appl Microbiol, 25, 183-188, 2002 Aug [PMID: 12353870] .

Scarlett CM, et al, Tomato pith necrosis caused by Pseudomonas corrugata n, sp Ann Appl Biol, 88, 105-114, 1978 .

Scarlett, C M, Fletcher, J, Roberts, P, Lelliott, R A, Tomato pith necrosis caused by Pseudomonas corrugata n. sp, Ann Appl Biol, 88, 105-114, 1978 .

Sutra L, Siverio F, Lopez MM, Hunault G, Bollet C, Gardan L, Taxonomy of Pseudomonas strains isolated from tomato pith necrosis: emended description of Pseudomonas corrugata and proposal of three unnamed fluorescent Pseudomonas genomospecies, Int J Syst Bacteriol, 47, 1020-1033, 1997 Oct [PMID: 9336901] .

Yamamoto S, Kasai H, Arnold DL, Jackson RW, Vivian A, Harayama S, Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes, Microbiology, 146 ( Pt 10), 2385-2394, 2000 Oct [PMID: 11021915] .

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