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LMG strain details

Last data update: 11 June 2014  

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Strain Number: LMG 2352   Add to cart
Speciesname: Pseudomonas viridiflava (Burkholder 1930) Dowson 1939 AL
Species comment: Authentic Pseudomonas species.
Other collections' numbers: ATCC 13223;Burkholder PV6;CECT 458;Clara G4;Dye PI3;ICMP 2848;NCPPB 602;NCPPB 635;NRRL B-895;PDDCC 2848
Restrictions: Biohazard group 1
Status: Type strain
Biological origin: Phaseolus sp.
Geographic origin: Switzerland
Isolated by: W.Burkholder
Depositor: National Collection of Plant Pathogenic Bacteria (NCPPB) United Kingdom
History: <- 1981, National Collection of Plant Pathogenic Bacteria (NCPPB) United Kingdom NCPPB 635 <- 1959, ATCC <- W.Burkholder (1927)
Conditions for growth on solid media: Medium 2, 28°C
Remarks: Slightly aberrant
Nucleotide sequences: Pseudomonas viridiflava partial rpoB gene for DNA-directed RNA polymerasebeta chain, strain LMG 2352T
EMBL Accession number: AJ717483 (LMG 2352), view at EMBL, GenBank, DDBJ
Length: 937
Creation date: 2004-09-25

Pseudomonas viridiflava strain CFBP 2107 thiopurine methyltransferase(tpmE) gene, partial cds
EMBL Accession number: AY616836 (CFBP 2107), view at EMBL, GenBank, DDBJ
Length: 203
Creation date: 2004-09-01

Pseudomonas viridiflava strain CECT 458 16S ribosomal RNA gene, partialsequence
EMBL Accession number: AY180972 (CECT 458), view at EMBL, GenBank, DDBJ
Length: 1439
Creation date: 2003-01-24

Pseudomonas syringae gyrB gene for DNA gyrase subunit B, partial cds,strain:PDDCC 2848
EMBL Accession number: AB039427 (PDDCC 2848), view at EMBL, GenBank, DDBJ
Length: 890
Creation date: 2000-11-02

Pseudomonas syringae rpoD gene for DNA-directed RNA polymerase subunit D,partial cds, strain:PDDCC 2848
EMBL Accession number: AB039520 (PDDCC 2848), view at EMBL, GenBank, DDBJ
Length: 807
Creation date: 2000-11-02

Pseudomonas viridiflava 16S ribosomal RNA gene, partial sequence
EMBL Accession number: AF094751 (ATCC 13223), view at EMBL, GenBank, DDBJ
Length: 1461
Creation date: 2000-10-05

Pseudomonas viridiflava OprF (oprF) gene, complete cds
EMBL Accession number: AF117970 (LMG 2352), view at EMBL, GenBank, DDBJ
Length: 1035
Creation date: 1999-04-12

P.viridiflava 16S rRNA gene
EMBL Accession number: Z76671 (LMG 2352), view at EMBL, GenBank, DDBJ
Length: 1492
Creation date: 1997-03-25

References: Approved Lists of Bacterial Names, Int J Syst Bacteriol, 30, 225-420, 1980 .

Ait Tayeb L, Ageron E, Grimont F, Grimont PA, Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates, Res Microbiol, 156, 763-773, 2005 Jun-Jul [PMID: 15950132] .

Billing E, "Pseudomonas viridiflava (Burkholder, 1930; Clara 1934)", J Appl Bacteriol, 33, 492-500, 1970 Sep [PMID: 4923557] .

Favre-Bonte S, Ranjard L, Colinon C, Prigent-Combaret C, Nazaret S, Cournoyer B, Freshwater selenium-methylating bacterial thiopurine methyltransferases: diversity and molecular phylogeny, Environ Microbiol, 7, 153-164, 2005 Feb [PMID: 15658983] .

Gonzalez AJ, Rodicio MR, Mendoza MC, Identification of an emergent and atypical Pseudomonas viridiflava lineage causing bacteriosis in plants of agronomic importance in a Spanish region, Appl Environ Microbiol, 69, 2936-2941, 2003 May [PMID: 12732569] .

Moore ERB, Mau M, Arnscheidt A, Boettger EC, Hutson RA, Collins MD, Van de Peer Y, De Wachter R, Timmis KN, The determination and comparison of the 16S rRNA gene sequences of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships, Syst Appl Microbiol, 19, 478-492, 1996 .

Vermeiren H, Willems A, Schoofs G, de Mot R, Keijers V, Hai W, Vanderleyden J, The rice inoculant strain Alcaligenes faecalis A15 is a nitrogen-fixing Pseudomonas stutzeri, Syst Appl Microbiol, 22, 215-224, 1999 May [PMID: 10390872] .

Yamamoto S, Kasai H, Arnold DL, Jackson RW, Vivian A, Harayama S, Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes, Microbiology, 146 ( Pt 10), 2385-2394, 2000 Oct [PMID: 11021915] .

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