ID pAGRIKOLA-CATMA5a62640 standard; circular DNA; UNK; 9721 BP. XX AC unknown; XX DE Collection number: LMBP EXPR00710 XX CC (c) BCCM/LMBP Plasmid collection (Ghent University, Belgium) XX CC Reference: Hilson et al., Genome Research 14 (2004), 2176-2189 XX FH Key Location/Qualifiers FH FT CDS 902..2110 FT /label="Tn10R" FT /note="Tn10 transposase for IS10 right" FT primer complement(7043..7061) FT /label="Agri\56" FT /note="" FT promoter 5705..6655 FT /label="CaMV\35S\promoter" FT /note="" FT rep_origin complement(1..279) FT /label="pMB1\ori" FT /note="" FT primer 6524..6543 FT /label="Agri\51" FT /note="" FT terminator complement(3870..4129) FT /label="nos\terminator" FT /note="" FT misc_feature 3826..3850 FT /label="LB" FT /note="left flanking T-DNA border" FT rep_origin 3263..3810 FT /label="pSa\ori" FT /note="" FT intron 7066..7834 FT /label="PDK\intron" FT /note="intron of the Flaveria trinervia PDK gene encoding FT pyruvate orthophosphate dikinase" FT promoter complement(4716..4999) FT /label="nos\promoter" FT /note="" FT CDS complement(4144..4695) FT /label="basta\herbicide\resistance" FT /note="bar gene confers resistance to herbicide Basta" FT CDS complement(2158..2973) FT /label="Tn903\neomycin\resistance" FT /note="nptI gene confers resistance to kanamycin and FT neomycin" FT primer 7863..7882 FT /label="Agri\64" FT /note="" FT primer complement(8478..8497) FT /label="Agri\69" FT /note="" FT misc_feature 9666..9691 FT /label="RB" FT /note="right flanking T-DNA border" FT terminator 8470..9177 FT /label="ocs\terminator" FT /note="" FT intron complement(7877..8058) FT /label="CAT1\intron" FT /note="intron of the Ricinus communis (castor bean) CAT1 FT gene encoding catalase" FT attenuator 8082..8106 FT /label="attB2" FT /note="" FT attenuator complement(8437..8461) FT /label="attB1" FT /note="" FT attenuator 6660..6684 FT /label="attB1" FT /note="" FT attenuator complement(7015..7039) FT /label="attB2" FT /note="" FT promoter 5189..5205 FT /label="T7\promoter" FT /note="" FT promoter complement(9220..9236) FT /label="SP6\promoter" FT /note="" FT promoter complement(9357..9440) FT /label="lac\promoter" FT /note="" FT primer 6687..6703 FT /label="5' gene specific primer" FT CDS 6704..6996 FT /label="CATMA5a62640" FT primer complement(6997..7013) FT /label="3' gene specific primer" FT primer complement(8108..8124) FT /label="3' gene specific primer" FT CDS 8125..8417 FT /label="CATMA5a62640" FT primer complement(8418..8434) FT /label="5' gene specific primer" XX SQ Sequence 9721 BP; 2822 A; 2249 C; 2152 G; 2498 T; 0 other; catgtgagca aaaggccagc aaaaggccag gaaccgtaaa aaggccgcgt tgctggcgtt 60 tttccatagg ctccgccccc ctgacgagca tcacaaaaat cgacgctcaa gtcagaggtg 120 gcgaaacccg acaggactat aaagatacca ggcgtttccc cctggaagct ccctcgtgcg 180 ctctcctgtt ccgaccctgc cgcttaccgg atacctgtcc gcctttctcc cttcgggaag 240 cgtggcgctt tctcatagct cacgctgtag gtatctcagt tcggtgtagg tcgttcgctc 300 caagctgggc tgtgtgcacg aaccccccgt tcagcccgac cgctgcgcct tatccggtaa 360 ctatcgtctt gagtccaacc cggtaagaca cgacttatcg ccactggcag cagccactgg 420 taacaggatt agcagagcga ggtatgtagg cggtgctaca gagttcttga agtggtggcc 480 taactacggc tacactagaa gaacagtatt tggtatctgc gctctgctga agccagttac 540 cttcggaaga agagttggta gctcttgatc cggcaaacaa accaccgctg gtagcggtgg 600 tttttttgtt tgcaagcagc agattacgcg cagaaaaaaa ggatctcaag aagatccttt 660 gatcttttct acggggtctg acgctcagtg gaacgaaaac tcacgttaag ggattttggt 720 catgagatta tcaaaaagga tcttcaccta gatcctttta aattaaaaat gaagttttaa 780 atcaatctaa agtactgatg aatcccctaa tgatttttat caaaatcatt aagttaaggt 840 agatacacat cttgtcatat gatcaaatgg tttcgccaaa aatcaataat cagacaacaa 900 aatgtgcgaa ctcgatattt tacacgactc tctttaccaa ttctgccccg aattacactt 960 aaaacgactc aacagcttaa cgttggcttg ccacgcctta cttgactgta aaactctcac 1020 tcttaccgaa cttggccgta acctgccaac caaagcgaga acaaaacata acatcaaacg 1080 aatcgaccga ttgttaggta atcgtcacct ccacaaagag cgactcgctg tataccgttg 1140 gcatgctagc tttatctgtt cgggcaatac gatgcccatt gtacttgttg actggtctga 1200 tatccgtgag caaaaacggc ttatggtatt gcgagcttca gtcgcactac acggtcgttc 1260 tgttactctt tatgagaaag cgttcccgct ttcagagcaa tgttcaaaga aagctcatga 1320 ccaatttcta gccgaccttg cgagcattct accgagtaac accacaccgc tcattgtcag 1380 tgatgctggc tttaaagtgc catggtataa atccgttgag aagctgggtt ggtactggtt 1440 aagtcgagta agaggaaaag tacaatatgc agacctagga gcggaaaact ggaaacctat 1500 cagcaactta catgatatgt catctagtca ctcaaagact ttaggctata agaggctgac 1560 taaaagcaat ccaatctcat gccaaattct attgtataaa tctcgctcta aaggccgaaa 1620 aaatcagcgc tcgacacgga ctcattgtca ccacccgtca cctaaaatct actcagcgtc 1680 ggcaaaggag ccatggattc tagcaactaa cttacctgtt gaaattcgaa cacccaaaca 1740 acttgttaat atctattcga agcgaatgca gattgaagaa accttccgag acttgaaaag 1800 tcctgcctac ggactaggct tacgccatag ccgaacgagc agctcagagc gttttgatat 1860 catgctgcta atcgccctga tgcttcaact aacatgttgg cttgcgggcg ttcatgctca 1920 gaaacaaggt tgggacaagc acttccaggc taacacagtc agaaatcgaa acgtactctc 1980 aacagttcgc ttaggcatgg aagttttgcg gcattctggc tacacaataa caagggaaga 2040 cttactcgtg gctgcaaccc tactagctca aaatttattc acacatggtt acgctttggg 2100 gaaattatga ggggatctct cagtctaaag tatatatgtg taacattggt ctagtgatta 2160 gaaaaactca tcgagcatca aatgaaactg caatttattc atatcaggat tatcaatacc 2220 atatttttga aaaagccgtt tctgtaatga aggagaaaac tcaccgaggc agttccatag 2280 gatggcaaga tcctggtatc ggtctgcgat tccgactcgt ccaacatcaa tacaacctat 2340 taatttcccc tcgtcaaaaa taaggttatc aagtgagaaa tcaccatgag tgacgactga 2400 atccggtgag aatggcaaaa gtttatgcat ttctttccag acttgttcaa caggccagcc 2460 attacgctcg tcatcaaaat cactcgcatc aaccaaaccg ttattcattc gtgattgcgc 2520 ctgagcgaga cgaaatacgc gatcgctgtt aaaaggacaa ttacaaacag gaatcgaatg 2580 caaccggcgc aggaacactg ccagcgcatc aacaatattt tcacctgaat caggatattc 2640 ttctaatacc tggaatgctg ttttccctgg gatcgcagtg gtgagtaacc atgcatcatc 2700 aggagtacgg ataaaatgct tgatggtcgg aagaggcata aattccgtca gccagtttag 2760 tctgaccatc tcatctgtaa catcattggc aacgctacct ttgccatgtt tcagaaacaa 2820 ctctggcgca tcgggcttcc catacaatcg gtagattgtc gcacctgatt gcccgacatt 2880 atcgcgagcc catttatacc catataaatc agcatccatg ttggaattta atcgcggcct 2940 tgagcaagac gtttcccgtt gaatatggct cataacaccc cttgtattac tgtttatgta 3000 agcagacagt tttattgttc atgatgatat atttttatct tgtgcaatgt aacatcagag 3060 attttgagac acaacgtggc tttgttgaat aaatcgaact tttgctgagt tgaaggatca 3120 gatcacgcat cttcccgaca acgcagaccg ttccgtggca aagcaaaagt tcaaaatcac 3180 caactggtcc acctacaaca aagctctcat caaccgtggc tccctcactt tctggctgga 3240 tgatggggcg attcaggcga tccccatcca acagcccgcc gtcgagcggg cttttttatc 3300 cccggaagcc tgtggataga gggtagttat ccacgtgaaa ccgctaatgc cccgcaaagc 3360 cttgattcac ggggctttcc ggcccgctcc aaaaactatc cacgtgaaat cgctaatcag 3420 ggtacgtgaa atcgctaatc ggagtacgtg aaatcgctaa taaggtcacg tgaaatcgct 3480 aatcaaaaag gcacgtgaga acgctaatag ccctttcaga tcaacagctt gcaaacaccc 3540 ctcgctccgg caagtagtaa cagcaagtag tatgttcaat tagcttttca attatgaata 3600 tatatatcaa ttattggtcg cccttggctt gtggacaatg cgctacgcgc accggctccg 3660 cccgtggaca accgcaagcg gttgcccacc gtcgagcgcc tttgcccaca acccggcggc 3720 cggccgcaac agatcgtttt ataaattttt ttttttgaaa aagaaaaagc ccgaaaggcg 3780 gcaacctctc gggcttctgg atttccgatc cccggaatta gatcttggca ggatatattg 3840 tggtgtaacg ttatcagctt gcatgccggt cgatctagta acatagatga caccgcgcgc 3900 gataatttat cctagtttgc gcgctatatt ttgttttcta tcgcgtatta aatgtataat 3960 tgcgggactc taatcataaa aacccatctc ataaataacg tcatgcatta catgttaatt 4020 attacatgct taacgtaatt caacagaaat tatatgataa tcatcgcaag accggcaaca 4080 ggattcaatc ttaagaaact ttattgccaa atgtttgaac gatctgcttg actctagggg 4140 tcatcagatt tcggtgacgg gcaggaccgg acggggcggc accggcaggc tgaagtccag 4200 ctgccagaaa cccacgtcat gccagttccc gtgcttgaag ccggccgccc gcagcatgcc 4260 gcggggggca tatccgagcg cctcgtgcat gcgcacgctc gggtcgttgg gcagcccgat 4320 gacagcgacc acgctcttga agccctgtgc ctccagggac ttcagcaggt gggtgtagag 4380 cgtggagccc agtcccgtcc gctggtggcg gggggagacg tacacggtcg actcggccgt 4440 ccagtcgtag gcgttgcgtg ccttccaggg acccgcgtag gcgatgccgg cgacctcgcc 4500 gtccacctcg gcgacgagcc agggatagcg ctcccgcaga cggacgaggt cgtccgtcca 4560 ctcctgcggt tcctgcggct cggtacggaa gttgaccgtg cttgtctcga tgtagtggtt 4620 gacgatggtg cagaccgccg gcatgtccgc ctcggtggca cggcggatgt cggccgggcg 4680 tcgttctggg ctcatggtag atcccctcga tcgagttgag agtgaatatg agactctaat 4740 tggataccga ggggaattta tggaacgtca gtggagcatt tttgacaaga aatatttgct 4800 agctgatagt gaccttaggc gacttttgaa cgcgcaataa tggtttctga cgtatgtgct 4860 tagctcatta aactccagaa acccgcggct cagtggctcc ttcaacgttg cggttctgtc 4920 agttccaaac gtaaaacggc ttgtcccgcg tcatcggcgg gggtcataac gtgactccct 4980 taattctccg ctcatgatcg ataacattaa cgcttacaat ttccattcgc cattcaggct 5040 gcgcaactgt tgggaagggc gatcggtgcg ggcctcttcg ctattacgcc agctggcgaa 5100 agggggatgt gctgcaaggc gattaagttg ggtaacgcca gggttttccc agtcacgacg 5160 ttgtaaaacg acggccagtg agcgcgcgta atacgactca ctatagggcg aattgggtac 5220 cgggcccccc ctcgaggtcg acggtatcga taagcttgat atcgaattcc tgcagcccgg 5280 gggatccact agttctagag cggccgctcg acgaattaat tccaatccca caaaaatctg 5340 agcttaacag cacagttgct cctctcagag cagaatcggg tattcaacac cctcatatca 5400 actactacgt tgtgtataac ggtccacatg ccggtatata cgatgactgg ggttgtacaa 5460 aggcggcaac aaacggcgtt cccggagttg cacacaagaa atttgccact attacagagg 5520 caagagcagc agctgacgcg tacacaacaa gtcagcaaac agacaggttg aacttcatcc 5580 ccaaaggaga agctcaactc aagcccaaga gctttgctaa ggccctaaca agcccaccaa 5640 agcaaaaagc ccactggctc acgctaggaa ccaaaaggcc cagcagtgat ccagccccaa 5700 aagagatctc ctttgccccg gagattacaa tggacgattt cctctatctt tacgatctag 5760 gaaggaagtt cgaaggtgaa ggtgacgaca ctatgttcac cactgataat gagaaggtta 5820 gcctcttcaa tttcagaaag aatgctgacc cacagatggt tagagaggcc tacgcagcag 5880 gtctcatcaa gacgatctac ccgagtaaca atctccagga gatcaaatac cttcccaaga 5940 aggttaaaga tgcagtcaaa agattcagga ctaattgcat caagaacaca gagaaagaca 6000 tatttctcaa gatcagaagt actattccag tatggacgat tcaaggcttg cttcataaac 6060 caaggcaagt aatagagatt ggagtctcta aaaaggtagt tcctactgaa tctaaggcca 6120 tgcatggagt ctaagattca aatcgaggat ctaacagaac tcgccgtgaa gactggcgaa 6180 cagttcatac agagtctttt acgactcaat gacaagaaga aaatcttcgt caacatggtg 6240 gagcacgacc ctctggtcta ccccaaaaat gtcaaagata cagtctcaga agaccaaagg 6300 gctattgaga cttttcaaca aaggataatt tcgggaaacc tcctcggatt ccattgccca 6360 gctatctgtc acttcatcga aaggacagta gaaaaggaag gtggctccta caaatgccat 6420 cattgcgata aaggaaaggc tatcattcaa gatctctctg ccgacagtgg tcccaaagat 6480 ggacccccac ccacgaggag catcgtggaa aaagaagacg ttccaaccac gtcttcaaag 6540 caagtggatt gatgtgacat ctccactgac gtaagggatg acgcacaatc ccactatcct 6600 tcgcaagacc cttcctctat ataaggaagt tcatttcatt tggagaggac acgctcgaga 6660 caagtttgta caaaaaagca ggcttcctta cgttctgtcg gactccctga gcttcttcct 6720 ggggagaaat tctccgacga ggatatgtcg gctgcgacca tcaggaagaa agccacggag 6780 gtcggtgctc aggttgatgc tttgggcacg gcggtgcaaa ataaccgcca ccgtgttttt 6840 ggtcagaatc gagatagtga tgtggataat aagaattttc atcggaatta tcaaaacggt 6900 gaacgagaag aagaagaaga agatgaggat gacaagagat tgaggagtgg cggccggtta 6960 ttggatcggg ttgacttgaa taaattaccc gacccggtaa tgcgaaggta cccgacccag 7020 ctttcttgta caaagtggtc tcgaggaatt cggtacccca gcttggtaag gaaataatta 7080 ttttcttttt tccttttagt ataaaatagt taagtgatgt taattagtat gattataata 7140 atatagttgt tataattgtg aaaaaataat ttataaatat attgtttaca taaacaacat 7200 agtaatgtaa aaaaatatga caagtgatgt gtaagacgaa gaagataaaa gttgagagta 7260 agtatattat ttttaatgaa tttgatcgaa catgtaagat gatatactag cattaatatt 7320 tgttttaatc ataatagtaa ttctagctgg tttgatgaat taaatatcaa tgataaaata 7380 ctatagtaaa aataagaata aataaattaa aataatattt ttttatgatt aatagtttat 7440 tatataatta aatatctata ccattactaa atattttagt ttaaaagtta ataaatattt 7500 tgttagaaat tccaatctgc ttgtaattta tcaataaaca aaatattaaa taacaagcta 7560 aagtaacaaa taatatcaaa ctaatagaaa cagtaatcta atgtaacaaa acataatcta 7620 atgctaatat aacaaagcgc aagatctatc aattttatat agtattattt ttcaatcaac 7680 attcttatta atttctaaat aatacttgta gttttattaa cttctaaatg gattgactat 7740 taattaaatg aattagtcga acatgaataa acaaggtaac atgatagatc atgtcattgt 7800 gttatcattg atcttacatt tggattgatt acagttggga agctgggttc gaaatcgata 7860 agcttgcgct gcagttatca tcatcatcat agacacacga aataaagtaa tcagattatc 7920 agttaaagct atgtaatatt tacaccataa ccaatcaatt aaaaaataga tcagtttaaa 7980 gaaagatcaa agctcaaaaa aataaaaaga gaaaagggtc ctaaccaaga aaatgaagga 8040 gaaaaactag aaatttacct gcacaagctt ggatcctcta gaccactttg tacaagaaag 8100 ctgggtcggg taccttcgca ttaccgggtc gggtaattta ttcaagtcaa cccgatccaa 8160 taaccggccg ccactcctca atctcttgtc atcctcatct tcttcttctt cttctcgttc 8220 accgttttga taattccgat gaaaattctt attatccaca tcactatctc gattctgacc 8280 aaaaacacgg tggcggttat tttgcaccgc cgtgcccaaa gcatcaacct gagcaccgac 8340 ctccgtggct ttcttcctga tggtcgcagc cgacatatcc tcgtcggaga atttctcccc 8400 aggaagaagc tcagggagtc cgacagaacg taaggaagcc tgcttttttg tacaaacttg 8460 tctagagtcc tgctttaatg agatatgcga gacgcctatg atcgcatgat atttgctttc 8520 aattctgttg tgcacgttgt aaaaaacctg agcatgtgta gctcagatcc ttaccgccgg 8580 tttcggttca ttctaatgaa tatatcaccc gttactatcg tatttttatg aataatattc 8640 tccgttcaat ttactgattg taccctacta cttatatgta caatattaaa atgaaaacaa 8700 tatattgtgc tgaataggtt tatagcgaca tctatgatag agcgccacaa taacaaacaa 8760 ttgcgtttta ttattacaaa tccaatttta aaaaaagcgg cagaaccggt caaacctaaa 8820 agactgatta cataaatctt attcaaattt caaaagtgcc ccaggggcta gtatctacga 8880 cacaccgagc ggcgaactaa taacgctcac tgaagggaac tccggttccc cgccggcgcg 8940 catgggtgag attccttgaa gttgagtatt ggccgtccgc tctaccgaaa gttacgggca 9000 ccattcaacc cggtccagca cggcggccgg gtaaccgact tgctgccccg agaattatgc 9060 agcatttttt tggtgtatgt gggccccaaa tgaagtgcag gtcaaacctt gacagtgacg 9120 acaaatcgtt gggcgggtcc agggcgaatt ttgcgacaac atgtcgaggc tcagcaggac 9180 ctgcaggcat gcaagctagc ttactagtga tgcatattct atagtgtcac ctaaatctgc 9240 ggccgccacc gcggtggagc tccagctttt gttcccttta gtgagggtta attgcgcgct 9300 tggcgtaatc atggtcatag ctgtttcctg tgtgaaattg ttatccgctc acaattccac 9360 acaacatacg agccggaagc ataaagtgta aagcctgggg tgcctaatga gtgagctaac 9420 tcacattaat tgcgttgcgc tcactgcccg ctttccagtc gggaaacctg tcgtgccagc 9480 tgcattaatg aatcggccaa cgcgcgggga gaggcggttt gcgtattggg cgctcttccg 9540 cttcctcgct cactgactcg ctgcgctcgg tcgttcggct gcggcgagcg gtatcagctc 9600 actcaaaggc ggtaatacgg ttatccacag aatcagggga taacgcagga aagaacatga 9660 aggccttgac aggatatatt ggcgggtaaa ctaagtcgct gtatgtgttt gtttgagatc 9720 t 9721 //