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GeneCorner plasmid details

Last data update: 24 January 2024 16:39 CET

Plasmid name: pEF6-CYLD-USP-C601A-myc/his (LMBP 8077)

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Price category: Cat. 1 (cf. price list)
Status: GeneCorner non-core plasmid
Depositor's sequence: p8077.gb
Sequence
analysis results
Genecorner:

-

Cloned DNA: Human CYLD lysine 63 deubiquitinase cDNA (CYLD, CYLD1, USPL2, GeneID 1540); mutated fragment
Myc epitope; C-terminal
Histidine tag (His-tag); C-terminal
Promoter: Human elongation factor 1α promoter (EF1α)
Phage T7 gene 10 promoter (T7g10)
Simian virus 40 early promoter (SV40 early)
Synthetic prokaryotic EM7 promoter
Escherichia coli lac operon promoter
Ribosome
binding site:
-
Terminator: Bovine growth hormone polyadenylation signal (BGH polyA)
Simian virus 40 polyadenylation signal (SV40 polyA)
Selection marker: Ampicillin (amp)
Blasticidin (bsd)
Replicon: Escherichia coli plasmid pMB1 origin
Phage f1 origin
Simian virus 40 bidirectional origin (SV40)
Host range: Escherichia coli; preferably recombination-deficient and endonuclease A deficient strains
Mammalian cells; SV40 permissive cells
Parental clone: pEF6/Myc-HisA; HA-CYLD-C601A
Further information: The plasmid was constructed by PCR amplifying the DUB domain of human CYLD from HA-CYLD-C601A and cloning it as a BamHI/EcoRV fragment into the BamHI/EcoRV opened pEF6/Myc-HisA vector.
The plasmid encodes for a catalytically inactive mutant of the DUB domain of human CYLD, containing a C601A mutation.
The nucleotide sequence of the wild type human CYLD cDNA corresponds with the EMBL Nucleotide Sequence database accession number AJ250014.1.
EMBL Accession number: AJ250014.1, view at EMBL, GenBank, DDBJ
Latest sequence update: 13/07/2016
Sequence detail:
Primers used to PCR amplify the DUB domain of human CYLD

Forward: 5' AGTAGGATCCTACCATGGGCTTGGAGATAATGATTGGGA
                BamHI

Reverse: 5' TAAGGATATCCTTTGTACAAACTCATTGTTGGACTCTG
                EcoRV
Authenticity test: The plasmid still needs to be subjected to the authenticity test.
Class: Recombinant plasmid
Type: Plasmid
History of deposit: This plasmid was deposited by Dr J. Staal(1) (2) and Prof. Dr R. Beyaert(1) (2).
(1) Inflammation Research Center, VIB, Ghent, Belgium
(2) Department of Biomedical Molecular Biology, Ghent University, Ghent, Belgium
Plasmid reference: -
Restricted distribution: - VIB/BCCM MTA
- Restricted to academic users
Distributed as: H/P active culture or plasmid DNA
Host for distribution: Escherichia coli K12 DH5α
Host reference: Focus 8 (1986), 9
Related host reference: Woodcock et al., Nucleic Acids Res. 17 (1989), 3469-3478 [PMID: 2657660]
Rodriguez-Quinones et al., Focus 15 (1993), 110-112
Hanahan, J. Mol. Biol. 166 (1983), 557-580 [PMID: 6345791] [DOI: 10.1016/s0022-2836(83)80284-8]
Hanahan, in 'DNA Cloning: A Practical Approach Volume I', IRL Press, Oxford (1985), 109-135 [ISSN/ISBN: 0947946187]
Grant et al., Proc. Natl. Acad. Sci. U.S.A. 87 (1990), 4645-4649 [PMID: 2162051]
Cultivation medium: LB-Lennox + ampicillin (100 μg/ml)
Cultivation temperature: 37°C
Biosafety level: L1
Other culture collection numbers: -

Refer in your Materials and Methods:

pEF6-CYLD-USP-C601A-myc/his (LMBP 8077) is available at BCCM/GeneCorner. This plasmid was deposited by Dr J. Staal and Prof. Dr R. Beyaert .

Note: Up-to-date, validated data are enclosed with the biological material. Nevertheless, these data are a snapshot at a given moment; further updates are always possible.

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