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GeneCorner plasmid details

Last data update: 24 January 2024 16:39 CET

Plasmid name: pSV51cE6Hy3f2 (LMBP 2211)

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Price category: Cat. 1 (cf. price list)
Status: GeneCorner non-core plasmid
Depositor's sequence: p2211.gb
Sequence
analysis results
Genecorner:

-

Cloned DNA: Mouse anti-hPLAP monoclonal antibody E6(Hy3,κ) cDNA; truncated mouse::human chimeric heavy chain of the F(ab')2 fragment E6(Hy3,κ)F2 (E6Hy3f2)
Promoter: Simian virus 40 early promoter (SV40 early)
Simian virus 40 late promoter (SV40 late)
Ribosome
binding site:
-
Terminator: Simian virus 40 polyadenylation signal (SV40 polyA)
Selection marker: Ampicillin (amp)
Replicon: Escherichia coli plasmid pMB1 origin
Simian virus 40 bidirectional origin (SV40)
Host range: Escherichia coli
Mammalian cells; SV40 permissive cells
Parental clone: pSV51cE6Hy3
Further information: The plasmid was constructed as follows: 1) The SalI-MstII fragment of pSV51cE6Hy3 was removed; 2) After filling in the SalI and MstII sticky ends with Klenow DNA polymerase, at least 2 multi-stop-linkers 'CTTAGTTAACTAAG' were added, repairing the SalI site; the succession of the two linkers resulted in the fomation of a second HindIII site.
The exact number of the multi-stop-linkers is unknown: certainly more than one, because an additional HindIII site was found.
After translation, E6Hy3f2 contains the first 27 amino acids of the original CH2 domain followed by 4 amino acids derived from the cloning strategy and the multi-stop-linker.
The chimeric CH1 domain contains 60 amino acids of mouse (E6H) and 37 amino acids of human (hIG3) origin.
The nucleotide sequence of the pOMMB part (located between nucleotide 3394 and 3126; taken from 'GENBANK Release 55; Locus : HUMIGHAF') differs in 1 nucleotide from our own determined
E6Hy3 nucleotide sequence, but there are no differences in amino acid sequence.
EMBL Accession number: J00231, view at EMBL, GenBank, DDBJ
Latest sequence update: 22/01/1997
Sequence detail:
Nucleotide sequence at the end of the coding information:

   CH2
   -------                 @
5' ACC CCT GAC TTA GTT AAC TAA G CTTAGTTAACTAAG TCGACTCTAGA 3'
   *               HpaI     HindIII  HpaI     SalI
             ------------------- --------------
              multi-stop-linker   multi-stop-linker


*: The ACC codon (Thr) is the 26th codon of the CH2 domain.
@: Termination codon.
Authenticity test: The plasmid still needs to be subjected to the authenticity test.
Class: Recombinant plasmid
Type: Plasmid
History of deposit: This plasmid was deposited by Dr K. De Sutter(1).
(1) Department of Biomedical Molecular Biology, Ghent University, Ghent, Belgium
Plasmid reference: De Sutter et al., Gene 113 (1992), 223-230 [PMID: 1572543]
Restricted distribution: - BCCM MTA
Distributed as: H/P active culture or plasmid DNA
Host for distribution: Escherichia coli K12 MC1061
Host reference: Casadaban et al., J. Mol. Biol. 138 (1980), 179-207 [PMID: 6997493]
Related host reference: Brigé et al., Biochem. J. 394 (2006), 335-344 [PMID: 16293111]
Cultivation medium: LB-Lennox + ampicillin (100 μg/ml)
Cultivation temperature: 37°C
Biosafety level: L1
Other culture collection numbers: -

Refer in your Materials and Methods:

pSV51cE6Hy3f2 (LMBP 2211) is available at BCCM/GeneCorner. This plasmid was deposited by Dr K. De Sutter and was published in De Sutter et al., 1992.

Note: Up-to-date, validated data are enclosed with the biological material. Nevertheless, these data are a snapshot at a given moment; further updates are always possible.

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